OMIA 000201-10042 : Coat colour, agouti in Peromyscus maniculatus
|Symbol||Description||Species||Chr||Location||OMIA gene details page||Other Links|
|ASIP||Peromyscus maniculatus||-||no genomic information (-..-)||ASIP||Ensembl|
By default, variants are sorted chronologically by year of publication, to provide a historical perspective. Readers can re-sort on any column by clicking on the column header. Click it again to sort in a descending order. To create a multiple-field sort, hold down Shift while clicking on the second, third etc relevant column headers.
WARNING! Inclusion of a variant in this table does not automatically mean that it should be used for DNA testing. Anyone contemplating the use of any of these variants for DNA testing should examine critically the relevant evidence (especially in breeds other than the breed in which the variant was first described). If it is decided to proceed, the location and orientation of the variant sequence should be checked very carefully.
|Breed(s)||Variant Phenotype||Gene||Allele||Type of Variant||Reference Sequence||Chr.||g. or m.||c. or n.||p.||Verbal Description||EVA ID||Year Published||PubMed ID(s)||Acknowledgements|
|New Hampshire||Melanic (non-agouti)||ASIP||deletion, gross (>20)||"a 125-kb deletion, which includes the upstream regulatory region and exons 1 and 2 of Agouti, results in a loss of Agouti expression"||2009||19649329|
|Alaska||Melanic (non-agouti)||ASIP||nonsense (stop-gain)||c.193?>?||p.(Q65*)||2009||19649329|
Note: the references are listed in reverse chronological order (from the most recent year to the earliest year), and alphabetically by first author within a year.
|2009||Kingsley, E.P., Manceau, M., Wiley, C.D., Hoekstra, H.E. :|
|Melanism in peromyscus is caused by independent mutations in agouti. PLoS One 4:e6435, 2009. Pubmed reference: 19649329. DOI: 10.1371/journal.pone.0006435.|
|1981||Robinson, R. :|
|The agouti alleles of Peromyscus. J Hered 72:132, 1981. Pubmed reference: 7276515.|
|1980||Horner, B.E., Potter, G.L., Van Ooteghem, S. :|
|A new black coat colour mutation in Peromyscus Journal of Heredity 71:49-51, 1980.|
|1971||Egoscue, H.J. :|
|Nonagouti, a new recessive color mutation in deer mice. J Hered 62:372, 1971. Pubmed reference: 5137683.|
- Created by Frank Nicholas on 24 Oct 2011
- Changed by Frank Nicholas on 24 Oct 2011
- Changed by Frank Nicholas on 12 Dec 2011
- Changed by Frank Nicholas on 21 Mar 2012